Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS18230 | Not Available | Positive | 3947800 - 3948579 | 29894.0 |
| penicillin acylase family protein | CE139_RS18235 | Not Available | Positive | 3948725 - 3951106 | 86821.7 |
| cmpa/nrta family abc transporter substrate-binding protein | CE139_RS18240 | Not Available | Positive | 3951350 - 3952546 | 43458.5 |
| antar domain-containing response regulator | CE139_RS18245 | Not Available | Positive | 3952558 - 3953130 | 21461.3 |
| alanine transaminase | CE139_RS18250 | Not Available | Positive | 3953264 - 3954505 | 45936.5 |
| hypothetical protein | CE139_RS18255 | Not Available | Positive | 3954600 - 3954794 | 7250.78 |
| hypothetical protein | CE139_RS18260 | Not Available | Positive | 3954794 - 3955549 | 28619.9 |
| duf4142 domain-containing protein | CE139_RS18265 | Not Available | Positive | 3955673 - 3956188 | 18586.1 |
| nitrate/nitrite transporter | CE139_RS18270 | Not Available | Positive | 3956727 - 3957938 | 42556.7 |
| gnat family n-acetyltransferase | CE139_RS18275 | Not Available | Negative | 3957974 - 3958546 | 21228.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





