Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circularly permuted type 2 atp-grasp protein | CE139_RS18180 | Not Available | Negative | 3939179 - 3940588 | 52487.1 |
| ribonuclease e inhibitor rrab | CE139_RS18185 | Not Available | Negative | 3940846 - 3941187 | 12415.5 |
| polyamine aminopropyltransferase | CE139_RS18190 | Not Available | Negative | 3941292 - 3942143 | 31530.6 |
| pld nuclease n-terminal domain-containing protein | CE139_RS18195 | Not Available | Negative | 3942240 - 3942455 | 7453.27 |
| acireductone synthase | CE139_RS18200 | Not Available | Negative | 3942558 - 3943244 | 24428.1 |
| 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase | CE139_RS18205 | Not Available | Negative | 3943241 - 3943792 | 20747.4 |
| methylthioribulose 1-phosphate dehydratase | CE139_RS18210 | Not Available | Negative | 3943789 - 3944403 | 23183.5 |
| mfs transporter | CE139_RS18215 | Not Available | Negative | 3944387 - 3945547 | 41757.8 |
| chorismate synthase | CE139_RS18220 | Not Available | Negative | 3945562 - 3946653 | 39043.6 |
| alpha/beta hydrolase | CE139_RS18225 | Not Available | Positive | 3946788 - 3947756 | 34478.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





