Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atpase domain-containing protein | CE139_RS18080 | Not Available | Negative | 3916321 - 3917817 | 54373.9 |
| acyl-coa thioesterase ii | CE139_RS18085 | Not Available | Negative | 3917866 - 3918741 | 32488.6 |
| histidine kinase famiy protein | CE139_RS18090 | Not Available | Positive | 3918913 - 3920529 | 59452.1 |
| exopolysaccharide biosynthesis protein | CE139_RS18095 | Not Available | Positive | 3920526 - 3921158 | 22738.5 |
| histone deacetylase | CE139_RS18100 | Not Available | Positive | 3921155 - 3922081 | 33522.1 |
| nyn domain-containing protein | CE139_RS18105 | Not Available | Positive | 3922094 - 3922870 | 28539.8 |
| zinc-dependent alcohol dehydrogenase | CE139_RS18110 | Not Available | Positive | 3923025 - 3924266 | 44227.1 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS18115 | Not Available | Positive | 3924320 - 3925564 | 43898.0 |
| fusc family protein | CE139_RS18120 | Not Available | Positive | 3925769 - 3926884 | 39616.5 |
| alkaline phosphatase family protein | CE139_RS18125 | Not Available | Negative | 3926903 - 3928795 | 70345.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





