Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional lysylphosphatidylglycerol flippase/synthetase mprf | CE139_RS18030 | Not Available | Positive | 3905142 - 3907799 | 96572.3 |
| virulence factor family protein | CE139_RS18035 | Not Available | Positive | 3907807 - 3909081 | 46236.7 |
| hypothetical protein | CE139_RS18040 | Not Available | Positive | 3909179 - 3909484 | 10678.5 |
| potassium transporter kup | CE139_RS18045 | Not Available | Negative | 3909531 - 3911372 | 67409.9 |
| 30s ribosomal protein s12 methylthiotransferase rimo | CE139_RS18050 | Not Available | Positive | 3911678 - 3913003 | 48966.7 |
| cd(ii)/pb(ii)-responsive transcriptional regulator | CE139_RS18055 | Not Available | Negative | 3913011 - 3913481 | 17380.6 |
| hypothetical protein | CE139_RS18060 | Not Available | Negative | 3913707 - 3913886 | 6258.44 |
| hypothetical protein | CE139_RS18065 | Not Available | Negative | 3914056 - 3915459 | 50223.7 |
| csbd family protein | CE139_RS18070 | Not Available | Positive | 3915596 - 3915847 | 8600.09 |
| response regulator | CE139_RS18075 | Not Available | Negative | 3915927 - 3916295 | 13655.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





