Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dsbe family thiol:disulfide interchange protein | CE139_RS17930 | Not Available | Negative | 3885682 - 3886215 | 20061.4 |
| heme lyase ccmf/nrfe family subunit | CE139_RS17935 | Not Available | Negative | 3886215 - 3888176 | 70725.6 |
| cytochrome c maturation protein ccme | CE139_RS17940 | Not Available | Negative | 3888173 - 3888628 | 16350.0 |
| heme exporter protein ccmd | CE139_RS17945 | Not Available | Negative | 3888625 - 3888801 | 6863.59 |
| heme abc transporter permease | CE139_RS17950 | Not Available | Negative | 3888798 - 3889544 | 27659.7 |
| heme exporter protein ccmb | CE139_RS17955 | Not Available | Negative | 3889555 - 3890226 | 23107.7 |
| cytochrome c biogenesis heme-transporting atpase ccma | CE139_RS17960 | Not Available | Negative | 3890223 - 3890828 | 21485.0 |
| flagellar hook-length control protein flik | CE139_RS17965 | Not Available | Positive | 3890936 - 3892510 | 56245.2 |
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | CE139_RS17970 | Not Available | Positive | 3892507 - 3892821 | 11289.5 |
| nucleoside triphosphate pyrophosphohydrolase | CE139_RS17975 | Not Available | Negative | 3893241 - 3894086 | 31654.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





