Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | CE139_RS17830 | Not Available | Positive | 3857658 - 3858701 | 37874.7 |
| mechanosensitive ion channel domain-containing protein | CE139_RS17835 | Not Available | Positive | 3858767 - 3861286 | 89451.3 |
| nudix hydrolase | CE139_RS17840 | Not Available | Positive | 3861292 - 3862032 | 26784.9 |
| serine o-acetyltransferase | CE139_RS17845 | Not Available | Negative | 3862014 - 3862802 | 28037.0 |
| gnat family n-acetyltransferase | CE139_RS17850 | Not Available | Negative | 3862818 - 3863384 | 20474.7 |
| helix-turn-helix domain-containing protein | CE139_RS17855 | Not Available | Negative | 3863394 - 3863936 | 19957.0 |
| duf2857 domain-containing protein | CE139_RS17860 | Not Available | Positive | 3864607 - 3864783 | 5940.59 |
| methyl-accepting chemotaxis protein | CE139_RS17865 | Not Available | Positive | 3865005 - 3866810 | 65361.5 |
| chemotaxis protein chew | CE139_RS17870 | Not Available | Positive | 3866813 - 3867268 | 15986.7 |
| cher family methyltransferase | CE139_RS17875 | Not Available | Positive | 3867265 - 3868512 | 45624.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





