Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| thiamine pyrophosphate-requiring protein | CE139_RS17780 | Not Available | Positive | 3845989 - 3847755 | 64254.2 |
| hypothetical protein | CE139_RS17785 | Not Available | Positive | 3847825 - 3848148 | 12035.0 |
| rhomboid family intramembrane serine protease | CE139_RS17790 | Not Available | Negative | 3848149 - 3849018 | 32083.8 |
| metallophosphoesterase | CE139_RS17795 | Not Available | Negative | 3849015 - 3849974 | 36556.4 |
| nad(+) kinase | CE139_RS17800 | Not Available | Negative | 3849974 - 3850858 | 32082.2 |
| duf1853 family protein | CE139_RS17805 | Not Available | Positive | 3850899 - 3851879 | 36016.1 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | CE139_RS17810 | Not Available | Negative | 3851852 - 3852775 | 32650.5 |
| chromosome partitioning protein para | CE139_RS17815 | Not Available | Negative | 3852787 - 3854100 | 49685.5 |
| nadph-dependent 2,4-dienoyl-coa reductase | CE139_RS17820 | Not Available | Negative | 3854388 - 3856442 | 73046.0 |
| carbon-nitrogen hydrolase family protein | CE139_RS17825 | Not Available | Positive | 3856639 - 3857661 | 36127.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





