Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS25385 | Not Available | Negative | 3830951 - 3831082 | 5110.4 |
| torf family putative porin | CE139_RS17735 | Not Available | Positive | 3831553 - 3832278 | 26037.7 |
| dead/deah box helicase | CE139_RS17740 | Not Available | Negative | 3832282 - 3836628 | 156865.0 |
| nad(p)-dependent oxidoreductase | CE139_RS17745 | Not Available | Negative | 3836860 - 3837804 | 33132.9 |
| maltoporin | CE139_RS17750 | Not Available | Positive | 3838013 - 3839242 | 44654.1 |
| ergothioneine biosynthesis protein egtb | CE139_RS17755 | Not Available | Positive | 3839341 - 3840624 | 47901.6 |
| l-histidine n(alpha)-methyltransferase | CE139_RS17760 | Not Available | Positive | 3840628 - 3841590 | 35954.6 |
| putative bifunctional diguanylate cyclase/phosphodiesterase | CE139_RS17765 | Not Available | Positive | 3841705 - 3843537 | 68241.9 |
| dead/deah box helicase | CE139_RS17770 | Not Available | Negative | 3843593 - 3844912 | 48219.5 |
| 50s ribosomal protein l3 n(5)-glutamine methyltransferase | CE139_RS17775 | Not Available | Negative | 3844963 - 3845877 | 33964.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





