Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1127 domain-containing protein | CE139_RS01375 | Not Available | Negative | 311734 - 311943 | 8202.93 |
| n-acetyl-gamma-glutamyl-phosphate reductase | CE139_RS01380 | Not Available | Positive | 312202 - 313155 | 33581.1 |
| ribosome biogenesis gtp-binding protein yiha/ysxc | CE139_RS01385 | Not Available | Negative | 313346 - 313984 | 23408.1 |
| thiol:disulfide interchange protein dsba/dsbl | CE139_RS01390 | Not Available | Positive | 314186 - 314815 | 22978.6 |
| diguanylate cyclase | CE139_RS01395 | Not Available | Positive | 315149 - 316936 | 65703.9 |
| n-acetylmuramoyl-l-alanine amidase | CE139_RS01400 | Not Available | Positive | 316962 - 317747 | 28904.7 |
| glxa family transcriptional regulator | CE139_RS01405 | Not Available | Negative | 317763 - 318860 | 40661.4 |
| choline abc transporter substrate-binding protein | CE139_RS01410 | Not Available | Positive | 319327 - 320265 | 34356.9 |
| choline abc transporter substrate-binding protein | CE139_RS01415 | Not Available | Positive | 320535 - 321473 | 34080.8 |
| choline abc transporter permease subunit | CE139_RS01420 | Not Available | Positive | 321590 - 322432 | 29888.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





