Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uroporphyrinogen-iii c-methyltransferase | CE139_RS17685 | Not Available | Positive | 3821034 - 3821780 | 25879.6 |
| ligase-associated dna damage response exonuclease | CE139_RS17690 | Not Available | Positive | 3821841 - 3822860 | 37476.1 |
| atp-dependent dna ligase | CE139_RS17695 | Not Available | Positive | 3822857 - 3824578 | 64223.0 |
| fusc family protein | CE139_RS17700 | Not Available | Positive | 3824581 - 3825684 | 38637.1 |
| hypothetical protein | CE139_RS17705 | Not Available | Negative | 3825624 - 3826088 | 16598.6 |
| transporter substrate-binding domain-containing protein | CE139_RS17710 | Not Available | Positive | 3826590 - 3827369 | 28205.6 |
| abc transporter permease | CE139_RS17715 | Not Available | Positive | 3827472 - 3828212 | 26778.3 |
| abc transporter permease | CE139_RS17720 | Not Available | Positive | 3828209 - 3828919 | 26668.0 |
| succinylglutamate desuccinylase/aspartoacylase family protein | CE139_RS17725 | Not Available | Positive | 3828957 - 3830069 | 40120.8 |
| abc transporter atp-binding protein | CE139_RS17730 | Not Available | Positive | 3830104 - 3830868 | 28012.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





