Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| high frequency lysogenization protein hfld | CE139_RS17585 | Not Available | Positive | 3796921 - 3797541 | 22935.9 |
| adenylosuccinate lyase | CE139_RS17590 | Not Available | Positive | 3797629 - 3798999 | 50333.1 |
| cupin domain-containing protein | CE139_RS17595 | Not Available | Positive | 3799058 - 3800236 | 44531.8 |
| histone acetyltransferase hpa2 | CE139_RS17600 | Not Available | Positive | 3800249 - 3800779 | 19875.1 |
| secretin n-terminal domain-containing protein | CE139_RS17605 | Not Available | Positive | 3800776 - 3801537 | 27595.5 |
| nadh-quinone oxidoreductase subunit a | CE139_RS17610 | Not Available | Positive | 3801795 - 3802208 | 14973.5 |
| nuob/complex i 20 kda subunit family protein | CE139_RS17615 | Not Available | Positive | 3802219 - 3802893 | 25361.5 |
| nadh-quinone oxidoreductase subunit c/d | CE139_RS17620 | Not Available | Positive | 3802945 - 3804729 | 67895.5 |
| nadh-quinone oxidoreductase subunit nuoe | CE139_RS17625 | Not Available | Positive | 3804732 - 3805232 | 18089.6 |
| nadh-quinone oxidoreductase subunit nuof | CE139_RS17630 | Not Available | Positive | 3805229 - 3806578 | 48584.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





