Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidylprolyl isomerase | CE139_RS17535 | Not Available | Positive | 3786773 - 3787327 | 20166.3 |
| abc transporter atp-binding protein | CE139_RS17540 | Not Available | Positive | 3787422 - 3789293 | 68199.0 |
| hypothetical protein | CE139_RS17545 | Not Available | Negative | 3789248 - 3789865 | 22562.7 |
| 6-carboxytetrahydropterin synthase qued | CE139_RS17550 | Not Available | Positive | 3790038 - 3790394 | 13587.3 |
| inorganic phosphate transporter | CE139_RS17555 | Not Available | Positive | 3790477 - 3791943 | 52914.3 |
| hypothetical protein | CE139_RS17560 | Not Available | Positive | 3792085 - 3792267 | 6391.18 |
| hypothetical protein | CE139_RS17565 | Not Available | Negative | 3792368 - 3792577 | 7778.39 |
| nadp-dependent isocitrate dehydrogenase | CE139_RS17570 | Not Available | Positive | 3793001 - 3795232 | 80849.0 |
| nudix hydrolase | CE139_RS17575 | Not Available | Positive | 3795361 - 3795813 | 16824.2 |
| trna 2-thiouridine(34) synthase mnma | CE139_RS17580 | Not Available | Positive | 3795815 - 3796924 | 40867.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





