Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CE139_RS17435 | Not Available | Negative | 3764797 - 3765414 | 22889.4 |
| efflux transporter outer membrane subunit | CE139_RS17440 | Not Available | Positive | 3765513 - 3766964 | 50942.6 |
| lyse family translocator | CE139_RS17445 | Not Available | Positive | 3767147 - 3767779 | 21748.6 |
| eal domain-containing protein | CE139_RS17450 | Not Available | Negative | 3767776 - 3770346 | 95079.0 |
| xanthine dehydrogenase small subunit | CE139_RS17455 | Not Available | Positive | 3770662 - 3772101 | 52171.4 |
| xanthine dehydrogenase molybdopterin binding subunit | CE139_RS17460 | Not Available | Positive | 3772094 - 3774493 | 86859.2 |
| xanthine dehydrogenase accessory protein xdhc | CE139_RS17465 | Not Available | Positive | 3774490 - 3775314 | 29542.9 |
| guanine deaminase | CE139_RS17470 | Not Available | Positive | 3775339 - 3776643 | 47640.6 |
| nadh:flavin oxidoreductase/nadh oxidase | CE139_RS17475 | Not Available | Negative | 3776858 - 3777955 | 39575.8 |
| arsr/smtb family transcription factor | CE139_RS17480 | Not Available | Positive | 3778048 - 3778371 | 12059.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





