Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad(p)/fad-dependent oxidoreductase | CE139_RS17335 | Not Available | Positive | 3739787 - 3740974 | 43006.6 |
| dipeptidase | CE139_RS17340 | Not Available | Negative | 3741008 - 3742009 | 35379.2 |
| hypothetical protein | CE139_RS17345 | Not Available | Negative | 3742066 - 3742326 | 9288.03 |
| cytochrome oxidase putative small subunit cydp | CE139_RS17350 | Not Available | Positive | 3742587 - 3742730 | 5184.69 |
| cytochrome ubiquinol oxidase subunit i | CE139_RS17355 | Not Available | Positive | 3742764 - 3744377 | 59205.2 |
| cytochrome d ubiquinol oxidase subunit ii | CE139_RS17360 | Not Available | Positive | 3744388 - 3745527 | 41204.5 |
| cytochrome bd-i oxidase subunit cydx | CE139_RS17365 | Not Available | Positive | 3745553 - 3745669 | 4326.15 |
| cyd operon ybge family protein | CE139_RS17370 | Not Available | Positive | 3745656 - 3745952 | 10597.6 |
| methyl-accepting chemotaxis protein | CE139_RS17375 | Not Available | Positive | 3746169 - 3748130 | 69708.9 |
| methyl-accepting chemotaxis protein | CE139_RS17380 | Not Available | Positive | 3748565 - 3750526 | 70291.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





