Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine desulfurase-like protein | CE139_RS17285 | Not Available | Positive | 3727073 - 3728308 | 45266.4 |
| murr/rpir family transcriptional regulator | CE139_RS17290 | Not Available | Positive | 3728345 - 3729214 | 31344.3 |
| allantoinase puue | CE139_RS17295 | Not Available | Positive | 3729267 - 3730169 | 34239.1 |
| dmt family transporter | CE139_RS17300 | Not Available | Negative | 3730297 - 3730746 | 15622.6 |
| dienelactone hydrolase family protein | CE139_RS17305 | Not Available | Negative | 3731077 - 3732069 | 35764.4 |
| helix-turn-helix domain-containing protein | CE139_RS17310 | Not Available | Positive | 3732250 - 3733218 | 35868.3 |
| transporter | CE139_RS17315 | Not Available | Positive | 3733284 - 3734210 | 33868.8 |
| mfs transporter | CE139_RS17320 | Not Available | Positive | 3734221 - 3735438 | 42345.6 |
| amidase | CE139_RS17325 | Not Available | Positive | 3735460 - 3736908 | 51263.9 |
| pas domain-containing protein | CE139_RS17330 | Not Available | Positive | 3737128 - 3739596 | 89293.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





