Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alginate export family protein | CE139_RS17235 | Not Available | Positive | 3717939 - 3719273 | 48792.6 |
| duf3237 domain-containing protein | CE139_RS17240 | Not Available | Positive | 3719315 - 3719803 | 17680.9 |
| mfs transporter | CE139_RS17245 | Not Available | Positive | 3719881 - 3721053 | 40982.4 |
| duf2790 domain-containing protein | CE139_RS17250 | Not Available | Positive | 3721219 - 3721473 | 8945.66 |
| hypothetical protein | CE139_RS17255 | Not Available | Negative | 3721612 - 3721806 | 7118.54 |
| endonuclease | CE139_RS17260 | Not Available | Positive | 3722036 - 3722998 | 35163.3 |
| glutamate carboxypeptidase | CE139_RS17265 | Not Available | Negative | 3723063 - 3724295 | 42990.5 |
| transporter substrate-binding domain-containing protein | CE139_RS17270 | Not Available | Positive | 3724803 - 3725579 | 28076.6 |
| amino acid abc transporter permease | CE139_RS17275 | Not Available | Positive | 3725644 - 3726321 | 24189.6 |
| amino acid abc transporter atp-binding protein | CE139_RS17280 | Not Available | Positive | 3726318 - 3727052 | 27258.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





