Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | CE139_RS01325 | Not Available | Negative | 303214 - 303804 | 21239.2 |
| glutathione s-transferase family protein | CE139_RS01330 | Not Available | Positive | 303881 - 304510 | 23321.2 |
| sdr family oxidoreductase | CE139_RS01335 | Not Available | Positive | 304657 - 305415 | 26490.8 |
| duf924 family protein | CE139_RS01340 | Not Available | Positive | 305455 - 305988 | 20000.4 |
| nucleoside/nucleotide kinase family protein | CE139_RS01345 | Not Available | Negative | 306044 - 306694 | 23741.2 |
| ydga family protein | CE139_RS01350 | Not Available | Positive | 306967 - 308427 | 51785.3 |
| duf4105 domain-containing protein | CE139_RS01355 | Not Available | Negative | 308627 - 310588 | 73765.9 |
| duf2388 domain-containing protein | CE139_RS01360 | Not Available | Negative | 310585 - 310905 | 11379.6 |
| duf2388 domain-containing protein | CE139_RS01365 | Not Available | Negative | 310940 - 311239 | 10364.5 |
| duf2388 domain-containing protein | CE139_RS01370 | Not Available | Negative | 311340 - 311660 | 11055.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





