Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ethd domain-containing protein | CE139_RS25375 | Not Available | Positive | 3696871 - 3697245 | 14453.9 |
| hypothetical protein | CE139_RS25380 | Not Available | Positive | 3697193 - 3697780 | 21405.5 |
| mfs transporter | CE139_RS17145 | Not Available | Positive | 3698247 - 3699470 | 42963.0 |
| sigma 54-interacting transcriptional regulator | CE139_RS17150 | Not Available | Negative | 3699712 - 3701655 | 70809.4 |
| duf1932 domain-containing protein | CE139_RS17155 | Not Available | Positive | 3701870 - 3702766 | 31470.0 |
| rraa family protein | CE139_RS17160 | Not Available | Positive | 3702763 - 3703467 | 25215.5 |
| citmhs family transporter | CE139_RS17165 | Not Available | Positive | 3703554 - 3704915 | 48664.9 |
| fadr/gntr family transcriptional regulator | CE139_RS17170 | Not Available | Positive | 3705470 - 3706192 | 26777.0 |
| abc transporter atp-binding protein | CE139_RS17175 | Not Available | Positive | 3706189 - 3707175 | 34581.4 |
| abc transporter atp-binding protein | CE139_RS17180 | Not Available | Positive | 3707172 - 3708260 | 39106.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





