Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mmge/prpd family protein | CE139_RS17090 | Not Available | Negative | 3684711 - 3686195 | 52889.7 |
| lysr family transcriptional regulator | CE139_RS17095 | Not Available | Positive | 3686305 - 3687201 | 32434.5 |
| methyl-accepting chemotaxis protein | CE139_RS17100 | Not Available | Positive | 3687499 - 3689157 | 58599.4 |
| hypothetical protein | CE139_RS17105 | Not Available | Negative | 3689278 - 3689649 | 14034.7 |
| 23s rrna (uridine(2552)-2'-o)-methyltransferase rlme | CE139_RS17110 | Not Available | Negative | 3689992 - 3690612 | 22671.4 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS17115 | Not Available | Positive | 3690858 - 3692507 | 59565.5 |
| trmh family rna methyltransferase | CE139_RS17120 | Not Available | Positive | 3692507 - 3693232 | 26639.9 |
| nuclear transport factor 2 family protein | CE139_RS17125 | Not Available | Positive | 3693694 - 3694122 | 15785.9 |
| amidase | CE139_RS17130 | Not Available | Negative | 3694600 - 3695952 | 47424.9 |
| tetr/acrr family transcriptional regulator | CE139_RS17135 | Not Available | Positive | 3696136 - 3696708 | 20687.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





