Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | CE139_RS17040 | Not Available | Positive | 3676243 - 3677007 | 28330.5 |
| transporter substrate-binding domain-containing protein | CE139_RS17045 | Not Available | Positive | 3677063 - 3677902 | 29878.7 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS17050 | Not Available | Positive | 3677978 - 3679273 | 47433.6 |
| lrp/asnc family transcriptional regulator | CE139_RS17055 | Not Available | Positive | 3679288 - 3679758 | 17391.1 |
| pyridoxamine 5'-phosphate oxidase family protein | CE139_RS17060 | Not Available | Positive | 3680129 - 3680761 | 23180.6 |
| duf1993 family protein | CE139_RS17065 | Not Available | Positive | 3680800 - 3681360 | 20414.5 |
| nudix domain-containing protein | CE139_RS17070 | Not Available | Negative | 3681397 - 3681993 | 22200.5 |
| deor/glpr family dna-binding transcription regulator | CE139_RS17075 | Not Available | Positive | 3682098 - 3682850 | 26389.9 |
| alpha/beta hydrolase | CE139_RS17080 | Not Available | Positive | 3682923 - 3683933 | 35847.1 |
| nipsnap family protein | CE139_RS17085 | Not Available | Negative | 3683948 - 3684559 | 22589.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





