Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux transporter outer membrane subunit | CE139_RS16940 | Not Available | Positive | 3652454 - 3653911 | 53140.1 |
| hypothetical protein | CE139_RS16945 | Not Available | Positive | 3654019 - 3654234 | 7811.76 |
| bpl-n domain-containing protein | CE139_RS16950 | Not Available | Positive | 3654310 - 3655053 | 26489.3 |
| nudix hydrolase | CE139_RS16955 | Not Available | Positive | 3655161 - 3655568 | 14416.4 |
| ybcc family protein | CE139_RS16960 | Not Available | Negative | 3655654 - 3658101 | 90712.6 |
| nadh-quinone oxidoreductase subunit l | CE139_RS16965 | Not Available | Negative | 3658098 - 3659624 | 53980.3 |
| lysr family transcriptional regulator | CE139_RS16970 | Not Available | Positive | 3659728 - 3660660 | 34565.4 |
| mfs transporter | CE139_RS16975 | Not Available | Negative | 3660770 - 3662074 | 46129.4 |
| nad(p)-dependent oxidoreductase | CE139_RS16980 | Not Available | Negative | 3662183 - 3663028 | 29053.2 |
| transketolase family protein | CE139_RS16985 | Not Available | Negative | 3663037 - 3664038 | 35941.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





