Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CE139_RS16890 | Not Available | Positive | 3639314 - 3640378 | 39673.0 |
| abc transporter atp-binding protein | CE139_RS16895 | Not Available | Positive | 3640391 - 3641443 | 38412.5 |
| abc transporter permease subunit | CE139_RS16900 | Not Available | Positive | 3641440 - 3643143 | 61418.6 |
| amp-binding protein | CE139_RS16905 | Not Available | Positive | 3643147 - 3644682 | 55636.8 |
| iclr family transcriptional regulator | CE139_RS16910 | Not Available | Positive | 3644773 - 3645567 | 29194.5 |
| tetr/acrr family transcriptional regulator | CE139_RS16915 | Not Available | Negative | 3645680 - 3646288 | 22167.9 |
| epoxide hydrolase family protein | CE139_RS16920 | Not Available | Positive | 3646376 - 3647530 | 42713.7 |
| dmt family transporter | CE139_RS16925 | Not Available | Negative | 3647633 - 3648556 | 32915.2 |
| abc transporter atp-binding protein | CE139_RS16930 | Not Available | Negative | 3648770 - 3650572 | 64875.7 |
| atp-binding protein | CE139_RS16935 | Not Available | Negative | 3650657 - 3651964 | 48607.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





