Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1989 domain-containing protein | CE139_RS16840 | Not Available | Positive | 3629398 - 3630015 | 22137.2 |
| urea carboxylase-associated family protein | CE139_RS16845 | Not Available | Positive | 3630026 - 3630667 | 23145.2 |
| amino acid abc transporter permease | CE139_RS16850 | Not Available | Positive | 3630671 - 3631324 | 23592.7 |
| amino acid abc transporter permease | CE139_RS16855 | Not Available | Positive | 3631324 - 3631983 | 23733.7 |
| duf1989 domain-containing protein | CE139_RS16860 | Not Available | Positive | 3632003 - 3632686 | 25189.0 |
| oprd family porin | CE139_RS16865 | Not Available | Positive | 3632934 - 3634172 | 46031.6 |
| argininosuccinate lyase | CE139_RS16870 | Not Available | Positive | 3634232 - 3635824 | 57985.2 |
| cation:dicarboxylate symporter family transporter | CE139_RS16875 | Not Available | Negative | 3635829 - 3637082 | 43636.6 |
| lysr family transcriptional regulator | CE139_RS16880 | Not Available | Positive | 3637183 - 3638133 | 34076.6 |
| enoyl-coa hydratase/isomerase family protein | CE139_RS16885 | Not Available | Positive | 3638401 - 3639159 | 27524.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





