Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | CE139_RS16790 | Not Available | Positive | 3618745 - 3620121 | 49434.2 |
| sugar abc transporter atp-binding protein | CE139_RS16795 | Not Available | Positive | 3620473 - 3622023 | 56505.4 |
| abc transporter permease | CE139_RS16800 | Not Available | Positive | 3622061 - 3623047 | 33498.3 |
| abc transporter substrate-binding protein | CE139_RS16805 | Not Available | Positive | 3623078 - 3624022 | 33251.7 |
| aldo/keto reductase | CE139_RS16810 | Not Available | Positive | 3624037 - 3625053 | 36430.4 |
| zinc-binding alcohol dehydrogenase family protein | CE139_RS16815 | Not Available | Positive | 3625165 - 3626175 | 36410.9 |
| l-rhamnose mutarotase | CE139_RS16820 | Not Available | Positive | 3626215 - 3626553 | 12993.6 |
| fadr/gntr family transcriptional regulator | CE139_RS16825 | Not Available | Positive | 3626618 - 3627325 | 25845.1 |
| murr/rpir family transcriptional regulator | CE139_RS16830 | Not Available | Positive | 3627456 - 3628340 | 32548.3 |
| transporter substrate-binding domain-containing protein | CE139_RS16835 | Not Available | Positive | 3628541 - 3629389 | 30061.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





