Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aldehyde dehydrogenase | CE139_RS16740 | Not Available | Negative | 3607519 - 3609012 | 52911.2 |
| glutamine synthetase family protein | CE139_RS16745 | Not Available | Negative | 3609024 - 3610406 | 51136.8 |
| lysr family transcriptional regulator | CE139_RS16750 | Not Available | Positive | 3610610 - 3611497 | 32151.8 |
| hypothetical protein | CE139_RS16755 | Not Available | Positive | 3611781 - 3611993 | 8054.69 |
| laci family dna-binding transcriptional regulator | CE139_RS16760 | Not Available | Negative | 3612087 - 3613082 | 35187.3 |
| gfo/idh/moca family protein | CE139_RS16765 | Not Available | Positive | 3613244 - 3614410 | 41406.4 |
| sugar phosphate isomerase/epimerase family protein | CE139_RS16770 | Not Available | Positive | 3614413 - 3615483 | 39429.6 |
| nucleoside permease | CE139_RS16775 | Not Available | Positive | 3615531 - 3616766 | 44129.5 |
| lysr family transcriptional regulator | CE139_RS16780 | Not Available | Negative | 3616763 - 3617671 | 33529.6 |
| duf2857 domain-containing protein | CE139_RS16785 | Not Available | Positive | 3617773 - 3618696 | 32497.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





