Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cyclodeaminase/cyclohydrolase family protein | CE139_RS16690 | Not Available | Positive | 3596294 - 3596926 | 21863.1 |
| duf2254 domain-containing protein | CE139_RS16695 | Not Available | Positive | 3596933 - 3598186 | 45316.3 |
| cation diffusion facilitator family transporter | CE139_RS16700 | Not Available | Negative | 3598197 - 3599135 | 34278.5 |
| amidase | CE139_RS16705 | Not Available | Positive | 3599364 - 3601070 | 60176.2 |
| nuclear transport factor 2 family protein | CE139_RS16710 | Not Available | Positive | 3601276 - 3601815 | 19676.4 |
| tetr/acrr family transcriptional regulator | CE139_RS16715 | Not Available | Negative | 3601832 - 3602443 | 21819.3 |
| mfs transporter | CE139_RS16720 | Not Available | Positive | 3602617 - 3603762 | 39215.8 |
| apc family permease | CE139_RS16725 | Not Available | Negative | 3603794 - 3605335 | 53961.6 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase family protein | CE139_RS16730 | Not Available | Negative | 3605394 - 3606140 | 26515.4 |
| nad(p)/fad-dependent oxidoreductase | CE139_RS16735 | Not Available | Negative | 3606186 - 3607463 | 45969.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





