Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1289 domain-containing protein | CE139_RS16590 | Not Available | Negative | 3575143 - 3575316 | 6634.28 |
| carbohydrate porin | CE139_RS16595 | Not Available | Negative | 3575409 - 3576809 | 51489.7 |
| age family epimerase/isomerase | CE139_RS16600 | Not Available | Negative | 3577031 - 3578242 | 46930.4 |
| carbohydrate kinase family protein | CE139_RS16605 | Not Available | Negative | 3578283 - 3579188 | 32650.7 |
| abc transporter atp-binding protein | CE139_RS16610 | Not Available | Negative | 3579317 - 3580417 | 40148.5 |
| carbohydrate abc transporter permease | CE139_RS16615 | Not Available | Negative | 3580429 - 3581259 | 30298.8 |
| carbohydrate abc transporter permease | CE139_RS16620 | Not Available | Negative | 3581252 - 3582169 | 33883.4 |
| abc transporter substrate-binding protein | CE139_RS16625 | Not Available | Negative | 3582302 - 3583564 | 45363.0 |
| atp-binding protein | CE139_RS16630 | Not Available | Negative | 3583775 - 3585223 | 54141.1 |
| response regulator | CE139_RS16635 | Not Available | Negative | 3585213 - 3585953 | 27367.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





