Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cysteine hydrolase family protein | CE139_RS16345 | Not Available | Positive | 3520687 - 3521235 | 19136.2 |
| transferase | CE139_RS16350 | Not Available | Negative | 3521220 - 3521867 | 22014.7 |
| tetr/acrr family transcriptional regulator | CE139_RS16355 | Not Available | Negative | 3521949 - 3522593 | 23237.3 |
| duf2147 domain-containing protein | CE139_RS16360 | Not Available | Positive | 3522740 - 3523159 | 14764.7 |
| torf family putative porin | CE139_RS16365 | Not Available | Positive | 3523181 - 3524065 | 32223.8 |
| xylulokinase | CE139_RS16370 | Not Available | Positive | 3524076 - 3525710 | 59024.8 |
| class ii aldolase/adducin family protein | CE139_RS16375 | Not Available | Positive | 3525707 - 3526363 | 23651.4 |
| aspartate aminotransferase family protein | CE139_RS16380 | Not Available | Positive | 3526372 - 3527853 | 53550.0 |
| class ii aldolase/adducin family protein | CE139_RS16385 | Not Available | Positive | 3527862 - 3528482 | 22285.7 |
| hypothetical protein | CE139_RS16390 | Not Available | Positive | 3528505 - 3529692 | 40311.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





