Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-glucose dehydrogenase family protein | CE139_RS01225 | Not Available | Negative | 283226 - 284623 | 50670.0 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | CE139_RS01230 | Not Available | Negative | 284620 - 285021 | 13616.2 |
| eama family transporter | CE139_RS01235 | Not Available | Negative | 285018 - 285359 | 11580.8 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | CE139_RS01240 | Not Available | Negative | 285356 - 286999 | 59863.2 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | CE139_RS01245 | Not Available | Negative | 286996 - 287877 | 32264.7 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | CE139_RS01250 | Not Available | Negative | 287889 - 289868 | 73511.7 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | CE139_RS01255 | Not Available | Negative | 289883 - 290872 | 36662.5 |
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | CE139_RS01260 | Not Available | Negative | 290869 - 292017 | 41341.7 |
| hypothetical protein | CE139_RS01265 | Not Available | Positive | 292318 - 292593 | 10030.7 |
| cell division protein zapa | CE139_RS01270 | Not Available | Positive | 292590 - 292874 | 10105.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





