Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| m20/m25/m40 family metallo-hydrolase | CE139_RS16150 | Not Available | Negative | 3479072 - 3480397 | 46215.0 |
| 3-hydroxyacyl-coa dehydrogenase nad-binding domain-containing protein | CE139_RS16155 | Not Available | Negative | 3480546 - 3482627 | 74278.1 |
| oprd family porin | CE139_RS16160 | Not Available | Negative | 3482646 - 3483896 | 45861.1 |
| abc transporter substrate-binding protein | CE139_RS16165 | Not Available | Negative | 3483959 - 3484957 | 35393.2 |
| abc transporter permease | CE139_RS16170 | Not Available | Negative | 3485000 - 3485767 | 27660.8 |
| abc transporter atp-binding protein | CE139_RS16175 | Not Available | Negative | 3485794 - 3486621 | 30038.6 |
| acetate--coa ligase family protein | CE139_RS16180 | Not Available | Negative | 3486839 - 3488926 | 72244.9 |
| enoyl-coa hydratase/isomerase family protein | CE139_RS16185 | Not Available | Negative | 3488923 - 3489735 | 28428.2 |
| iclr family transcriptional regulator | CE139_RS16190 | Not Available | Positive | 3489818 - 3490660 | 30264.5 |
| aromatic alcohol reductase | CE139_RS16195 | Not Available | Negative | 3490807 - 3491769 | 35231.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





