Pseudomonas oryzihabitans strain MS8

RodMotileaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas oryzihabitans strain MS8 is a Gram-negative, rod-shaped bacterium that thrives in damp and humid environments, including farm settings, fresh water, soil, and on surfaces of respiratory devices and mechanical ventilators. This species exhibits aerobic characteristics and is motile due to the presence of flagella, which allows it to navigate through its diverse habitats. This strain has been documented to inhabit various hosts, including Homo sapiens (humans), Oryza sativa (rice), Capsicum annuum (bell pepper), Cucumis melo (melon), and Capsicum chinense (habanero pepper). Within humans, Pseudomonas oryzihabitans strain MS8 is associated with a range of health effects, including bacteremia, pneumonia, peritonitis, meningitis, and septicemia, among others. Its pathogenicity in plants, particularly rice, indicates a potential role in agricultural contexts. The presence of this bacterium in both clinical settings and agricultural environments underscores its ecological versatility and its dual impact on human health and plant life. As it can exist in mechanical ventilators and respiratory equipment, the strain poses risks for patients with compromised health, especially those reliant on such devices. Understanding the habitats and effects of Pseudomonas oryzihabitans strain MS8 can inform infection control practices and agricultural management strategies to mitigate its pathogenic potential in both humans and plants.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas oryzihabitans
Strainstrain MS8

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranesNot Available
Image of Pseudomonas oryzihabitans strain MS8
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatdamp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils
Biotic relationshipNot Available
Host(s)Homo sapiens, Oryza sativa, Capsicum annuum
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityHuman; Plant

Genome Summary

Pseudomonas oryzihabitans strain MS8 chromosome.

Gene Summary

Adenine Count

937969 bp

Thymine Count

937205 bp

Guanine Count

1780010 bp

Cytosine Count

1778132 bp

Genome Length

5436061 bp

Protein-coding Genes

4960 genes

Non-Coding Genes

127 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
apc family permeaseCE139_RS16050Not AvailableNegative3454563 - 345587945543.2
pas domain-containing proteinCE139_RS16055Not AvailablePositive3456274 - 3459195107544.0
transporterCE139_RS16060Not AvailableNegative3459205 - 346011932754.6
helix-turn-helix transcriptional regulatorCE139_RS16065Not AvailableNegative3460227 - 346121936648.9
alpha/beta hydrolaseCE139_RS16070Not AvailablePositive3461497 - 346245634402.4
d-alanyl-d-alanine carboxypeptidase family proteinCE139_RS16075Not AvailableNegative3462472 - 346364142628.9
sensor histidine kinaseCE139_RS16080Not AvailableNegative3463754 - 346512750301.8
response regulator transcription factorCE139_RS16085Not AvailableNegative3465105 - 346578224866.3
extracellular solute-binding proteinCE139_RS16090Not AvailablePositive3465934 - 346672227467.4
citmhs family transporterCE139_RS16095Not AvailableNegative3466740 - 346805346320.9

Displaying genes 3251 – 3260 of 5087 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
SepticaemiaCausesPMC10277831
Prosthetic valve endocarditisCausesPMC10277831
PeritonitisCausesPMC10277831
Periorbital cellulitisCausesPMC10865052
SepsisCausesPMC5423562
BacteremiaCausesPMC5423562
PeritonitisCausesPMC5423562
EndophthalmitisCausesPMC5423562
Biliary tract infectionsCausesPMC5423562
MeningitisCausesPMC5423562

Displaying health effects 1 – 10 of 15 in total