Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| apc family permease | CE139_RS16050 | Not Available | Negative | 3454563 - 3455879 | 45543.2 |
| pas domain-containing protein | CE139_RS16055 | Not Available | Positive | 3456274 - 3459195 | 107544.0 |
| transporter | CE139_RS16060 | Not Available | Negative | 3459205 - 3460119 | 32754.6 |
| helix-turn-helix transcriptional regulator | CE139_RS16065 | Not Available | Negative | 3460227 - 3461219 | 36648.9 |
| alpha/beta hydrolase | CE139_RS16070 | Not Available | Positive | 3461497 - 3462456 | 34402.4 |
| d-alanyl-d-alanine carboxypeptidase family protein | CE139_RS16075 | Not Available | Negative | 3462472 - 3463641 | 42628.9 |
| sensor histidine kinase | CE139_RS16080 | Not Available | Negative | 3463754 - 3465127 | 50301.8 |
| response regulator transcription factor | CE139_RS16085 | Not Available | Negative | 3465105 - 3465782 | 24866.3 |
| extracellular solute-binding protein | CE139_RS16090 | Not Available | Positive | 3465934 - 3466722 | 27467.4 |
| citmhs family transporter | CE139_RS16095 | Not Available | Negative | 3466740 - 3468053 | 46320.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





