Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| malonate transporter subunit madm | CE139_RS15900 | Not Available | Positive | 3421481 - 3422248 | 25552.0 |
| lysr family transcriptional regulator | CE139_RS15905 | Not Available | Negative | 3422258 - 3423166 | 33532.6 |
| lysr family transcriptional regulator | CE139_RS15910 | Not Available | Positive | 3423300 - 3424199 | 33569.6 |
| mfs transporter | CE139_RS15915 | Not Available | Positive | 3424388 - 3425704 | 46853.0 |
| succinylglutamate desuccinylase/aspartoacylase family protein | CE139_RS15920 | Not Available | Positive | 3425752 - 3426750 | 36538.8 |
| transketolase family protein | CE139_RS15925 | Not Available | Negative | 3426805 - 3427803 | 35521.2 |
| transketolase | CE139_RS15930 | Not Available | Negative | 3427803 - 3428651 | 30950.8 |
| mfs transporter | CE139_RS15935 | Not Available | Negative | 3428666 - 3429964 | 47444.1 |
| sdr family nad(p)-dependent oxidoreductase | CE139_RS15940 | Not Available | Negative | 3430043 - 3430792 | 25568.9 |
| lysr substrate-binding domain-containing protein | CE139_RS15945 | Not Available | Positive | 3430987 - 3431898 | 34087.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





