Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS25805 | Not Available | Negative | 3400009 - 3400881 | 30149.5 |
| duf2857 domain-containing protein | CE139_RS25810 | Not Available | Negative | 3400864 - 3402060 | 43146.8 |
| lysr family transcriptional regulator | CE139_RS15810 | Not Available | Negative | 3402094 - 3403017 | 33761.6 |
| isovaleryl-coa dehydrogenase | CE139_RS15815 | Not Available | Positive | 3403385 - 3404548 | 42118.2 |
| carboxyl transferase domain-containing protein | CE139_RS15820 | Not Available | Positive | 3404559 - 3406166 | 57702.7 |
| enoyl-coa hydratase-related protein | CE139_RS15825 | Not Available | Positive | 3406170 - 3406970 | 28597.3 |
| acetyl/propionyl/methylcrotonyl-coa carboxylase subunit alpha | CE139_RS15830 | Not Available | Positive | 3406967 - 3408901 | 68421.0 |
| hydroxymethylglutaryl-coa lyase | CE139_RS15835 | Not Available | Positive | 3408898 - 3409812 | 31384.6 |
| laci family dna-binding transcriptional regulator | CE139_RS15840 | Not Available | Positive | 3409892 - 3410926 | 36620.5 |
| mfs transporter | CE139_RS15845 | Not Available | Positive | 3411075 - 3412430 | 48604.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





