Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha/beta fold hydrolase | CE139_RS15755 | Not Available | Positive | 3390390 - 3391229 | 29932.7 |
| aldehyde dehydrogenase | CE139_RS15760 | Not Available | Positive | 3391226 - 3392707 | 52848.1 |
| flavin reductase family protein | CE139_RS15765 | Not Available | Positive | 3392723 - 3393208 | 17288.8 |
| gntr family transcriptional regulator | CE139_RS15770 | Not Available | Positive | 3393336 - 3394091 | 28346.0 |
| duf1330 domain-containing protein | CE139_RS15775 | Not Available | Negative | 3394136 - 3394423 | 10717.5 |
| bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/gtp cyclohydrolase ii | CE139_RS15780 | Not Available | Positive | 3394502 - 3395611 | 40096.2 |
| abc transporter substrate-binding protein | CE139_RS15785 | Not Available | Positive | 3395803 - 3396825 | 37045.1 |
| abc transporter permease | CE139_RS15790 | Not Available | Positive | 3396827 - 3397753 | 33271.0 |
| abc transporter permease | CE139_RS15795 | Not Available | Positive | 3397758 - 3398567 | 29112.1 |
| abc transporter atp-binding protein | CE139_RS15800 | Not Available | Positive | 3398584 - 3399726 | 41745.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





