Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ncs1 family nucleobase:cation symporter-1 | CE139_RS15610 | Not Available | Negative | 3356368 - 3357813 | 52604.4 |
| gntr family transcriptional regulator | CE139_RS15615 | Not Available | Positive | 3358112 - 3358816 | 25609.8 |
| aspartate/glutamate racemase family protein | CE139_RS15620 | Not Available | Positive | 3358825 - 3359556 | 25147.5 |
| bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase | CE139_RS15625 | Not Available | Positive | 3359907 - 3362507 | 93757.2 |
| aaa domain-containing protein | CE139_RS15630 | Not Available | Positive | 3362841 - 3365546 | 100628.0 |
| hypothetical protein | CE139_RS15635 | Not Available | Positive | 3365595 - 3365810 | 7135.82 |
| endo-1,4-beta-xylanase | CE139_RS15640 | Not Available | Positive | 3365911 - 3366987 | 39831.4 |
| hypothetical protein | CE139_RS15645 | Not Available | Positive | 3367268 - 3367486 | 6869.37 |
| potassium-transporting atpase subunit f | CE139_RS15650 | Not Available | Positive | 3367629 - 3367718 | 3171.14 |
| potassium-transporting atpase subunit kdpa | CE139_RS15655 | Not Available | Positive | 3367728 - 3369425 | 59166.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





