Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metal abc transporter substrate-binding protein | CE139_RS15460 | Not Available | Positive | 3323355 - 3324275 | 32767.6 |
| vwa domain-containing protein | CE139_RS15465 | Not Available | Negative | 3324508 - 3325116 | 22353.9 |
| atp-binding protein | CE139_RS15470 | Not Available | Negative | 3325173 - 3326216 | 36900.9 |
| cobaltochelatase subunit cobn | CE139_RS15475 | Not Available | Negative | 3326218 - 3329967 | 137815.0 |
| cobalamin biosynthesis protein cobw | CE139_RS15480 | Not Available | Negative | 3329974 - 3331026 | 37871.3 |
| cobalamin biosynthesis protein | CE139_RS15485 | Not Available | Positive | 3331587 - 3331961 | 12763.4 |
| segregation and condensation protein a | CE139_RS15490 | Not Available | Negative | 3331952 - 3332680 | 27616.8 |
| l-threonylcarbamoyladenylate synthase | CE139_RS15495 | Not Available | Negative | 3332791 - 3333420 | 23146.1 |
| php domain-containing protein | CE139_RS15500 | Not Available | Negative | 3333417 - 3334289 | 31524.7 |
| septation protein a | CE139_RS15505 | Not Available | Positive | 3334350 - 3334934 | 22064.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





