Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methyl-accepting chemotaxis protein | CE139_RS25795 | Not Available | Negative | 3315609 - 3316364 | 26154.8 |
| duf2857 domain-containing protein | CE139_RS25800 | Not Available | Negative | 3316467 - 3317285 | 29594.7 |
| sensor histidine kinase | CE139_RS15420 | Not Available | Negative | 3317353 - 3318690 | 48820.4 |
| response regulator transcription factor | CE139_RS15425 | Not Available | Negative | 3318687 - 3319352 | 24490.5 |
| pepsy domain-containing protein | CE139_RS15430 | Not Available | Negative | 3319353 - 3319628 | 10426.5 |
| pepsy domain-containing protein | CE139_RS15435 | Not Available | Negative | 3319649 - 3319957 | 11299.4 |
| duf3253 domain-containing protein | CE139_RS15440 | Not Available | Negative | 3320032 - 3320289 | 9361.33 |
| dna topoisomerase ib | CE139_RS15445 | Not Available | Positive | 3320380 - 3321477 | 41382.5 |
| zinc abc transporter atp-binding protein azta | CE139_RS15450 | Not Available | Positive | 3321743 - 3322477 | 26653.1 |
| metal abc transporter permease | CE139_RS15455 | Not Available | Positive | 3322474 - 3323343 | 30114.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





