Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lyse family translocator | CE139_RS15365 | Not Available | Positive | 3305196 - 3305801 | 21904.6 |
| benzoate/h(+) symporter bene family transporter | CE139_RS15370 | Not Available | Positive | 3305811 - 3306998 | 40300.4 |
| nadp-dependent oxidoreductase | CE139_RS15375 | Not Available | Positive | 3307054 - 3308055 | 35905.3 |
| ggdef domain-containing protein | CE139_RS15380 | Not Available | Positive | 3308229 - 3309152 | 34186.1 |
| 23s rrna pseudouridine(2605) synthase rlub | CE139_RS15385 | Not Available | Negative | 3309183 - 3310244 | 39077.3 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | CE139_RS15390 | Not Available | Negative | 3310539 - 3311177 | 22691.7 |
| 6-phosphogluconolactonase | CE139_RS15395 | Not Available | Negative | 3311198 - 3311908 | 25039.9 |
| glucose-6-phosphate dehydrogenase | CE139_RS15400 | Not Available | Negative | 3311895 - 3313364 | 55621.6 |
| murr/rpir family transcriptional regulator | CE139_RS15405 | Not Available | Positive | 3313529 - 3314398 | 31678.1 |
| ai-2e family transporter | CE139_RS15410 | Not Available | Negative | 3314436 - 3315485 | 37933.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





