Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| laci family dna-binding transcriptional regulator | CE139_RS15315 | Not Available | Positive | 3294977 - 3295996 | 35894.1 |
| ribokinase | CE139_RS15320 | Not Available | Positive | 3295986 - 3296894 | 30569.7 |
| d-ribose pyranase | CE139_RS15325 | Not Available | Positive | 3296891 - 3297295 | 14104.3 |
| eal domain-containing protein | CE139_RS15330 | Not Available | Negative | 3297292 - 3300156 | 106414.0 |
| ferritin-like domain-containing protein | CE139_RS15335 | Not Available | Positive | 3300509 - 3301021 | 18695.3 |
| manganese catalase family protein | CE139_RS15340 | Not Available | Positive | 3301061 - 3301960 | 32413.2 |
| hypothetical protein | CE139_RS15345 | Not Available | Positive | 3302301 - 3302723 | 15418.5 |
| glutathione s-transferase family protein | CE139_RS15350 | Not Available | Negative | 3302770 - 3303369 | 22969.5 |
| plp-dependent aminotransferase family protein | CE139_RS15355 | Not Available | Negative | 3303371 - 3304540 | 42989.8 |
| marr family winged helix-turn-helix transcriptional regulator | CE139_RS15360 | Not Available | Positive | 3304628 - 3305107 | 17625.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





