Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycolate oxidase subunit glcf | CE139_RS01130 | Not Available | Negative | 258163 - 259395 | 44226.4 |
| glycolate oxidase subunit glce | CE139_RS01135 | Not Available | Negative | 259408 - 260454 | 37761.4 |
| glycolate oxidase subunit glcd | CE139_RS01140 | Not Available | Negative | 260454 - 261953 | 53151.1 |
| transcriptional regulator glcc | CE139_RS01145 | Not Available | Positive | 262162 - 262929 | 28206.9 |
| hemolysin family protein | CE139_RS01150 | Not Available | Positive | 263076 - 264440 | 50722.6 |
| diguanylate cyclase | CE139_RS01155 | Not Available | Negative | 264453 - 266354 | 69739.9 |
| m23 family metallopeptidase | CE139_RS01160 | Not Available | Negative | 266543 - 267430 | 31844.2 |
| helix-turn-helix transcriptional regulator | CE139_RS01165 | Not Available | Positive | 267780 - 268580 | 29272.5 |
| peptidoglycan dd-metalloendopeptidase family protein | CE139_RS01170 | Not Available | Negative | 268797 - 269696 | 31965.3 |
| response regulator | CE139_RS01175 | Not Available | Negative | 269774 - 270694 | 32590.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





