Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | CE139_RS15215 | Not Available | Positive | 3274517 - 3275872 | 48440.0 |
| duf192 domain-containing protein | CE139_RS15220 | Not Available | Negative | 3276085 - 3276558 | 17278.9 |
| mfs transporter | CE139_RS15225 | Not Available | Positive | 3276623 - 3277831 | 41124.1 |
| mfs transporter | CE139_RS15230 | Not Available | Positive | 3277828 - 3279036 | 41293.0 |
| hypothetical protein | CE139_RS15235 | Not Available | Negative | 3279117 - 3279311 | 6690.74 |
| response regulator | CE139_RS15240 | Not Available | Positive | 3279562 - 3279978 | 15161.3 |
| abc-f family atpase | CE139_RS15245 | Not Available | Positive | 3280219 - 3281808 | 58582.0 |
| malate dehydrogenase (quinone) | CE139_RS15250 | Not Available | Positive | 3282264 - 3283760 | 54533.4 |
| gamma-glutamyltransferase family protein | CE139_RS15255 | Not Available | Negative | 3283905 - 3285698 | 63376.9 |
| duf1294 domain-containing protein | CE139_RS15260 | Not Available | Negative | 3285776 - 3286276 | 18870.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





