Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| protease sohb | CE139_RS15165 | Not Available | Negative | 3256738 - 3257763 | 38161.2 |
| scp2 sterol-binding domain-containing protein | CE139_RS15170 | Not Available | Positive | 3258023 - 3258334 | 10936.9 |
| efflux transporter outer membrane subunit | CE139_RS15175 | Not Available | Negative | 3258386 - 3259867 | 52971.4 |
| efflux rnd transporter permease subunit | CE139_RS15180 | Not Available | Negative | 3259864 - 3262974 | 111900.0 |
| multidrug efflux rnd transporter permease subunit | CE139_RS15185 | Not Available | Negative | 3262976 - 3266107 | 111188.0 |
| mdta/muxa family multidrug efflux rnd transporter periplasmic adaptor subunit | CE139_RS15190 | Not Available | Negative | 3266117 - 3267352 | 44043.3 |
| thiol peroxidase | CE139_RS15195 | Not Available | Negative | 3267511 - 3268011 | 17501.0 |
| translocation/assembly module tamb domain-containing protein | CE139_RS15200 | Not Available | Negative | 3268091 - 3271783 | 130853.0 |
| autotransporter assembly complex protein tama | CE139_RS15205 | Not Available | Negative | 3271780 - 3273513 | 63887.4 |
| exodeoxyribonuclease iii | CE139_RS15210 | Not Available | Positive | 3273635 - 3274447 | 30936.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





