Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsenical resistance protein arsh | CE139_RS15015 | Not Available | Positive | 3228009 - 3228731 | 27091.6 |
| duf4113 domain-containing protein | CE139_RS25785 | Not Available | Negative | 3228743 - 3228808 | 2535.13 |
| hypothetical protein | CE139_RS25790 | Not Available | Negative | 3229052 - 3229390 | 12378.7 |
| trna dihydrouridine(20/20a) synthase dusa | CE139_RS15030 | Not Available | Positive | 3229634 - 3230644 | 37490.0 |
| transaldolase | CE139_RS15035 | Not Available | Positive | 3230692 - 3231618 | 33888.3 |
| anti-sigma factor antagonist rssc | CE139_RS15040 | Not Available | Negative | 3231631 - 3232113 | 17781.4 |
| two-component system response regulator rssb | CE139_RS15045 | Not Available | Negative | 3232110 - 3233294 | 43708.5 |
| pilz domain-containing protein | CE139_RS15050 | Not Available | Positive | 3233499 - 3233798 | 10771.9 |
| vacj family lipoprotein | CE139_RS15055 | Not Available | Negative | 3233858 - 3234484 | 22844.8 |
| duf4404 family protein | CE139_RS15060 | Not Available | Positive | 3234704 - 3234973 | 10022.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





