Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-binding protein | CE139_RS14970 | Not Available | Negative | 3220681 - 3221739 | 39111.5 |
| response regulator | CE139_RS14975 | Not Available | Negative | 3221742 - 3222482 | 27583.4 |
| sigma-70 family rna polymerase sigma factor | CE139_RS14980 | Not Available | Positive | 3222835 - 3223410 | 21565.8 |
| anti-sigma factor domain-containing protein | CE139_RS14985 | Not Available | Positive | 3223407 - 3224114 | 25324.4 |
| fasciclin domain-containing protein | CE139_RS14990 | Not Available | Positive | 3224189 - 3224752 | 19514.0 |
| signal peptidase ii | CE139_RS14995 | Not Available | Positive | 3224989 - 3225489 | 17625.6 |
| duf2857 domain-containing protein | CE139_RS25355 | Not Available | Positive | 3225498 - 3225804 | 11570.8 |
| metalloregulator arsr/smtb family transcription factor | CE139_RS15000 | Not Available | Positive | 3225873 - 3226247 | 14055.1 |
| arsenic transporter | CE139_RS15005 | Not Available | Positive | 3226241 - 3227530 | 45515.9 |
| arsenate reductase arsc | CE139_RS15010 | Not Available | Positive | 3227539 - 3228012 | 16572.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





