Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator | CE139_RS14925 | Not Available | Negative | 3209948 - 3210328 | 13828.2 |
| hypothetical protein | CE139_RS14930 | Not Available | Negative | 3210441 - 3210653 | 6721.91 |
| methyl-accepting chemotaxis protein | CE139_RS25775 | Not Available | Negative | 3210919 - 3211782 | 30161.8 |
| duf2857 domain-containing protein | CE139_RS25780 | Not Available | Negative | 3211774 - 3212544 | 27672.7 |
| oprd family porin | CE139_RS14940 | Not Available | Negative | 3212671 - 3214023 | 48318.6 |
| abc transporter atp-binding protein | CE139_RS14945 | Not Available | Negative | 3214974 - 3216398 | 50679.6 |
| abc transporter permease | CE139_RS14950 | Not Available | Negative | 3216395 - 3217216 | 28342.9 |
| abc transporter permease | CE139_RS14955 | Not Available | Negative | 3217213 - 3218148 | 33078.4 |
| abc transporter substrate-binding protein | CE139_RS14960 | Not Available | Negative | 3218145 - 3219686 | 54724.7 |
| ef-hand domain-containing protein | CE139_RS14965 | Not Available | Negative | 3219995 - 3220579 | 19046.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





