Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CE139_RS14825 | Not Available | Positive | 3186623 - 3187930 | 47541.3 |
| l-iditol 2-dehydrogenase | CE139_RS14830 | Not Available | Positive | 3187999 - 3188772 | 27219.6 |
| duf1349 domain-containing protein | CE139_RS14835 | Not Available | Negative | 3188785 - 3189378 | 22253.4 |
| dna replication terminus site-binding protein | CE139_RS14840 | Not Available | Negative | 3189929 - 3190873 | 35630.9 |
| alkaline phosphatase d family protein | CE139_RS14845 | Not Available | Negative | 3190992 - 3192545 | 57356.2 |
| 3-phosphoshikimate 1-carboxyvinyltransferase | CE139_RS14850 | Not Available | Positive | 3192749 - 3194017 | 44237.0 |
| hybrid sensor histidine kinase/response regulator | CE139_RS14855 | Not Available | Positive | 3194061 - 3197120 | 114188.0 |
| helix-turn-helix domain-containing protein | CE139_RS14860 | Not Available | Negative | 3197080 - 3197997 | 34144.3 |
| 4-hydroxybenzoate 3-monooxygenase | CE139_RS14865 | Not Available | Positive | 3198112 - 3199296 | 43405.7 |
| tsup family transporter | CE139_RS14870 | Not Available | Positive | 3199374 - 3200150 | 27195.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





