Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hipa domain-containing protein | CE139_RS14775 | Not Available | Negative | 3176751 - 3178037 | 48067.8 |
| helix-turn-helix domain-containing protein | CE139_RS14780 | Not Available | Negative | 3178034 - 3178285 | 8895.74 |
| lysr family transcriptional regulator | CE139_RS14785 | Not Available | Negative | 3178423 - 3179340 | 34023.7 |
| 5-oxoprolinase subunit pxpa | CE139_RS14790 | Not Available | Positive | 3179459 - 3180223 | 27500.2 |
| acetyl-coa carboxylase | CE139_RS14795 | Not Available | Positive | 3180316 - 3180567 | 8558.06 |
| acetyl-coa carboxylase biotin carboxylase subunit | CE139_RS14800 | Not Available | Positive | 3180585 - 3181937 | 48592.9 |
| 5-oxoprolinase subunit b family protein | CE139_RS14805 | Not Available | Positive | 3181934 - 3182806 | 32697.0 |
| biotin-dependent carboxyltransferase family protein | CE139_RS14810 | Not Available | Positive | 3182803 - 3183777 | 34021.0 |
| l-glyceraldehyde 3-phosphate reductase | CE139_RS14815 | Not Available | Positive | 3184335 - 3185372 | 38180.2 |
| arac family transcriptional regulator | CE139_RS14820 | Not Available | Negative | 3185460 - 3186374 | 34131.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





