Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| metq/nlpa family abc transporter substrate-binding protein | CE139_RS01080 | Not Available | Negative | 246390 - 247166 | 28126.0 |
| metq/nlpa family abc transporter substrate-binding protein | CE139_RS01085 | Not Available | Negative | 247235 - 248017 | 28472.2 |
| methionine abc transporter permease | CE139_RS01090 | Not Available | Negative | 248069 - 248734 | 24030.3 |
| methionine abc transporter atp-binding protein | CE139_RS01095 | Not Available | Negative | 248734 - 249741 | 36585.1 |
| catalase hpii | CE139_RS01100 | Not Available | Positive | 250025 - 252154 | 78437.9 |
| rida family protein | CE139_RS01105 | Not Available | Negative | 252502 - 252882 | 13348.2 |
| bifunctional gtp diphosphokinase/guanosine-3',5'-bis pyrophosphate 3'-pyrophosphohydrolase | CE139_RS01110 | Not Available | Negative | 252942 - 255101 | 80127.3 |
| dna-directed rna polymerase subunit omega | CE139_RS01115 | Not Available | Negative | 255105 - 255377 | 10085.8 |
| malate synthase g | CE139_RS01120 | Not Available | Negative | 255532 - 257706 | 78379.5 |
| heme-binding protein | CE139_RS01125 | Not Available | Negative | 257744 - 258148 | 13584.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





