Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CE139_RS13205 | Not Available | Negative | 2843960 - 2844547 | 22156.0 |
| hypothetical protein | CE139_RS13210 | Not Available | Negative | 2844758 - 2844970 | 7852.11 |
| Prophage repressor | CE139_RS13215 | Not Available | Negative | 2844993 - 2845844 | 30524.3 |
| Cro protein | CE139_RS13220 | Not Available | Positive | 2845843 - 2846046 | 7260.78 |
| Dna-binding protein | CE139_RS25295 | Not Available | Positive | 2846209 - 2846949 | 27233.9 |
| Helix-turn-helix dna binding domain protein | CE139_RS13230 | Not Available | Positive | 2846946 - 2847800 | 30314.7 |
| Putative replication protein p | CE139_RS13235 | Not Available | Positive | 2847800 - 2848462 | 24120.9 |
| hypothetical protein | CE139_RS13240 | Not Available | Positive | 2848581 - 2848859 | 9953.0 |
| hypothetical protein | CE139_RS13245 | Not Available | Positive | 2848859 - 2849053 | 7430.77 |
| Ref | CE139_RS13250 | Not Available | Positive | 2849050 - 2849361 | 11249.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





