Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas oryzihabitans |
| Strain | strain MS8 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | damp environments; farm environments; Fresh water; humid environments; mechanical ventilators; respiratory devices; respiratory equipment; rice paddles; sink drains; soil; soils |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens, Oryza sativa, Capsicum annuum |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human; Plant |
Gene Summary
Adenine Count
937969 bp
Thymine Count
937205 bp
Guanine Count
1780010 bp
Cytosine Count
1778132 bp
Genome Length
5436061 bp
Protein-coding Genes
4960 genes
Non-Coding Genes
127 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| urea abc transporter permease subunit urtb | CE139_RS14625 | Not Available | Positive | 3143046 - 3143963 | 32991.3 |
| urea abc transporter permease subunit urtc | CE139_RS14630 | Not Available | Positive | 3143974 - 3145137 | 41840.4 |
| urea abc transporter atp-binding protein urtd | CE139_RS14635 | Not Available | Positive | 3145134 - 3145898 | 27936.9 |
| urea abc transporter atp-binding subunit urte | CE139_RS14640 | Not Available | Positive | 3146122 - 3146811 | 25482.1 |
| formamidase | CE139_RS14645 | Not Available | Positive | 3146997 - 3148226 | 44193.4 |
| fmdb family zinc ribbon protein | CE139_RS14650 | Not Available | Positive | 3148275 - 3148622 | 12278.5 |
| aliphatic amidase | CE139_RS14655 | Not Available | Positive | 3148656 - 3149699 | 38575.0 |
| aaa family atpase | CE139_RS14660 | Not Available | Positive | 3149724 - 3150758 | 38323.5 |
| allophanate hydrolase | CE139_RS14665 | Not Available | Negative | 3150813 - 3152615 | 63003.5 |
| urea carboxylase | CE139_RS14670 | Not Available | Negative | 3152627 - 3156226 | 129920.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Septicaemia | Causes | PMC10277831 |
| Prosthetic valve endocarditis | Causes | PMC10277831 |
| Peritonitis | Causes | PMC10277831 |
| Periorbital cellulitis | Causes | PMC10865052 |
| Sepsis | Causes | PMC5423562 |
| Bacteremia | Causes | PMC5423562 |
| Peritonitis | Causes | PMC5423562 |
| Endophthalmitis | Causes | PMC5423562 |
| Biliary tract infections | Causes | PMC5423562 |
| Meningitis | Causes | PMC5423562 |





